CDS
| Accession Number | TCMCG006C17795 |
| gbkey | CDS |
| Protein Id | XP_022558845.1 |
| Location | complement(join(161238..161489,161603..161803,161884..162018,162109..162213,162296..162523,162597..162750,162913..162974,163046..163192,163292..163339,163442..163573,163661..163807,164117..164200,164276..164413,164639..164739,164817..164943,165161..165355,165563..165607,165702..165830,165916..166018,166114..166343,166419..166601,166782..166934,167064..167159,167382..167487,167586..167671,167761..167898,167983..168225,168329..168457,168532..168579,168679..168790,168875..168909,168997..169105,169189..169403,169532..169599,169681..169753,169838..170017,170284..170505,170592..170686,170964..171067,171172..171425,171502..171624,171721..171858,171979..172173,172257..172451,172527..172655,172746..172859,173065..173389,173473..173701,173769..174060,174188..174286)) |
| Gene | LOC106399970 |
| GeneID | 106399970 |
| Organism | Brassica napus |
Protein
| Length | 2416aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA293435 |
| db_source | XM_022703124.1 |
| Definition | CCR4-NOT transcription complex subunit 1-like isoform X1 [Brassica napus] |
EGGNOG-MAPPER Annotation
| COG_category | K |
| Description | Domain of unknown function (DUF3819) |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko03019 [VIEW IN KEGG] |
| KEGG_ko |
ko:K12604
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko03018
[VIEW IN KEGG] map03018 [VIEW IN KEGG] |
| GOs | - |
Sequence
| CDS: ATGGTGATGAACCCGTCCAAGGTCGCCGGCCATGCCCGGTTCTTACTCGAGAGCTTTAGCGATTCGGAAGTTGATTCAATCGCCCAAGAGATATGTCAGCTGGTTGAGTATGGTGTTGAGACAAGCATTCCAGTTCTCAAGACATGTTTAGATTGCTTCGCCGCCCGTAGAAGCCATCCTAATTCCTCGCAGCTTGAGAAACTAATATCCTTGGTCTTTAAACGTGTCCTGAAACACTCTAATCTCATTTCTCACGCCCTTCGAGATGTCGAGGTCACTGATGAGTTCGTGGCTGATTTGACTAATGCTCTCGACTTTTCAATCTCTGACAAAATTAGCTTTGCTCTGTCTCTAGCCGAGTTTGACAGCTCCGATGATGCAAACGCAGCTGGTCGAAACTTATTATTGGCCATGATTGAGCAACTGTGTGCCAATTCTGCCCAGATTGAGTCAACCGAGCAAGTTCAGAATATTCTTTTGTTTCTCCAGAATTCTGAGGACCTCTCCACCCATCTTAATTCCTTCTTACATATTTTGTCTTCTACTCTACCCAAAGATGACTTTTCTTTTGCTCTTACTCCTATCCTTTCTCAACAGCTTCACGAAGCTGATGTTTTAAGGTGCATCGATTTTGACACTGAGTTTGATGCTATCTTAGCTGAAATCGACAAGGAAATTTCTGTTGGAGATCTTATGGGAGAATTAGGTTGTGGTGTTACTGCTGATGCACAACTATGCAAAGATATCTTGTCTAGTTTCGCACCATTAACAGAGGCTACTATCTCAAGGATTCTTGCTAACGTTGCTCGTACTTGTGCTGATCTAGAAGATAACCACACCACCTTTTCAACATTTAGTCTGGTCCTTGGTTGCTGCATTCCCACTGAACTTTCCACTCCAATGTCGTGGAGTGTTGACATCTTAACTGAGACAATCACGCAACTTGCTCCTGGCACAAGTTGGAGGAAAGTAATCGAGAATCTTGACCATAGTGGATTTGAGATCCCCAATAAGGAATCTTTCTCGTTTTTCATGCGGCTATATAAAACTGCTTGCAAGGACCCGTTTCCTCTTGATGCTGTATGCGGTTCTGTCTGGAAAAATGTGGAAGGTCAAATATCGTTTCTTAAATATGCAATAGCATCCCCACCAGAAGTATTCACCTTTATGCATTCTCCCAGGAAGCTGGTATATATTGACGATAACATGCACAGCCATGAGCATCAATTAGGACTTTCCAATGAAGCATGGCTATCTCTCGATCTCTTAGATGTCTTATGCCAACTAGCTGAGAGAGGTCATACTGTTTTAGTTAGTTCGCTGCTCCAGTATCCACTCGCACAGTGTCCCAAAACCTTGCTTACTGGAATGACACACATCAAAACTGCCTATAATCTCATTCAGCGAGAGGTTGTTTCTGCTATTCTTCCAGTGATAATTACGAACTCACAGGATAGTGGTTTTATCCTTAATCTTTGGCATCAGAATACTGAGCTTGTTCTGTGGGGGATTTTAAATGCCCAAAATCTTAAAGCAGACCGCATACTCAATTTAATTGATATCTGCCATGAACTGAAGGTTCTTTCTGTTGTTTTAGAATCGGTTCCAATCTCATTCAGCATCAGATTGGCAGTCCTTGCCTCACTGAGAGGCTATTTGGACATCGAGAACTGGTTGCCAAACTTTCTATGTGTGTATAAAGACCTCTTTGCGGAGGAATGTCTCAAGTTTGTCAAAAATGTGCATTTTAGCGAATCAGAGGATTTTACTTCCGAACATTTCCATCCTTCTGATCCGTTATCAGATGTTCATTTGGATGCAACGACTTCGCTTTTGAAAGTTTTGAAAGCTCATGATAATGTGATTACTTCATCTCAACTGGTCGATGAGATAGAAAAGGTCAATGCAGCAATCTTGGATTGTAATTCTAAACTGCAGAATGGTGAGGCTAAAGTTTCATCAGCTTCGAATGCATATGGAGACGATATTGAGGCAGAAGCGAACGCTTATTTCCATCAAATGTTTTCGGGTCAGTTGAGTGTTGATGCAATGGTTCAAATGCTTTCGCGATACAAGGACTCCTCGGTTCAAAGGGAAAAATCAATTTTTGATTGCATGATTGCTAATCTGTTCGAGGAATATCGTTTTTTTCCCAAGTATCCCGAGAGGCAGCTAAAAATAGCCTCCATCCTTTTTGGTTCTGTTATCAAGCACCAGCTTATAAGTTCTCTCACACTTGGGATGGCACTGCGTTTAGTCTTGGATTCTTTGCGTAAACCTGCAGATTCAAAAATGTTTCTGTTTGGAAGCAAAGCTCTGGAACAGTTCGTGAATCGTCTGGTTGAATTACCTCAGTACTGTAACCATATTTTGCAAATATCTCATCTGCGTAGCACTCACCCCGAGTTAGTCACTGTTATTGAACAAGCACTTTCAAGGATATCATCTGGTAATTTAGAATCAGAGGCAGTTTCGAACCCTGGTCCTTCACAGTCTTTCCCAGGAAATGGCGAGTTTAGTGGTTCTGGAATTGGCCAGTCTGCTCTCCAACTTCCTTTACCTGTACAGTCTCAACAGAAAAATGAAGTGCACATTAATGGCAACAGCAGAGTGCCAAGTGTGCCATTTATCGAAGCAAAGACACTTCTGCCCTCTTCATCTACTACTTCCGCTGATGTTTCTGTCATTCCTAAGAATCCTGGTATTTCGACTTCTTCATTAACTTCAGCTGGTTTTGTTCGTCCCGCTCGTGGAGCCACTTCGACGAGGTTTGGGTCTGCTTTGAACATAGAGACCCTGGTTGCAGCAGCAGAGAGAAGGGAAAACGCAATAGAGACTCCACCTTCAGATGTTCAGGACAAAATTTCTTTCATAATCAATAATATCTCTACAGCCAATATTGAATCCAAGGGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATTGAGTCCAAGTGGAAAGAGTTCGCTGAGATTTTGCCTCAACAGTACTATCCCTGGTTCGCTCAGTATATGGTTATGAAAAGAGCGAGCATCGAACCCAATTTTCATGATTTGTACTTGAAGTTCTTGGACAAAGTTGATTCCAAGCTGTTGTTTAAGGAGATACTTCAAAATACTTACGAAAATTGCAAGGTTCTCTTGGGTTCAGAGCTCATAAAGTCAAGTTCGGAAGAGCGATCTCTGCTCAAAAATTTAGGCAGTTGGCTTGGAAAGTTGACCATTGGAAGGAATTATGTTTTGAGGGCGCGAGAAATTGATCCAAAATCCTTAATTGTGGAGGCATATGAAAAAGGGTTGATGATTGCAGTCATTCCATTTACTTCAAAGGTTCTGGAGCCATGCCAAAACAGTATTGCGTATCAGCCTCCCAATCCTTGGACAATGGCTATACTCGGGTTGCTCGCTGAGATTTATTCAATGCCGAACCTTAAAATGAATCTGAAGTTTGACATAGAGGTTTTATTCAAGAACCTTGGTGTTGATTTGAAGGAAGTAGCGCCGACTTCCCTTCTAAAGGACCGGAAGAGAGAAATAGATGGGAATCCTGATTTTAGCAACAAAGATCTTGGAGTGACACATATATCTCAACCACAGATGATCCAAGAGCCGAAAACAATTTCTCCTCTTAAGCAAATCGACCTACCTCTGGATGTTGCAGATTCACCTAATACAGACGCTTCCTCGAAGTTATTCTCACAGTATGTAGCCCCTCAACGTGTATATACTAATACTTTGATGGAAGACGAAAAAGTTTCCACTTTAGGCTTGTCTGATCAGCTTCCATCACCTCAAGGACTGTTCCCGTCAACTCCATCCCCATTGTTTTCTATTAGCCAGCTGTCAGCAGCACTTCCCAATATTGGAAATCATGTTGTTATTAATCAGAAATTAAGCGGATTTGCTATGCACTTCCCATTTCATAGAGTGGTACCACTTGCCATGGACAGAGCTCTCAAGGAGATTGTGTCTGGTATTGTTCAGCGAAGTGTATGTATTGCTTGCCAAACAACAAAAGAACTTGTGCTGAAGGACTATACCTTGGAACCAGATGAGACACGTATATATAATGCAGCTCACTTGATGGTTGCTAGTCTAGCTGGGAGTTTGGCCCATGTGACGTGCAAGGAACCCCTGCGCACTTCAATATCATGTCATCTACGGAATTCGCTCCAGGGGATGAATATTAAAAATGAAGCTCTTGAACAAATTGTGCAACTTGTCACCAATGACAACCTTGATTTGGGTTGTGCTGCCATTGAACAGGCGGCTACAGAGAAGGCAATACAAACTATTGATGCGGACATTGACCAGCAATTGTTGTTACGGAAAAAGCATAGAGATGGTGCCGGATCCTCCCTTTTTGATCCGAACATGCTATCGCAGAATTCTGTTAGTTTTATACCAGAGTCCCTCCGTCCAAAACCGGGACATCTATCCCTGTCTCAACAGCGAGTTTATGAGGACTTTGTTCAGCTTCCTTGGCAAAAGCAGACAACTCAAACGTCACACGGTTTATCTGCCGCTTCAAGCTCATCTGGCGATGTTGGGCTTAGTAGTAGTTATGGTCCAGCATCAGGTAAAAGTGCTTCGGACTTTTTGTCTAGTGCTGGAAACGCTCGGATGGATAACGTCTCCCGGCCATTGGATATCTCTGTGGAGGGTTTTGAATCTCCTCCAGTTTCACTTTTAAGCTCACAAGTTGATCCAGCTGTTGACACAGCCGGTCTTCAGTTCTCTAAATCCCTTTCGACCTCTGAATTGAGCCTGGTTGAATCCTCTGACACCGCTGTGAAAGAAACTGGAGCATCATTGCAGACTTTGACTTCAGCTGCTACCATGGAGCGTCTTGGTGGAAATAATATTATACAGCCTTCTCTGTCCACGAGAGATGCACTAGAAAAGTATCATATTGTTACACAGAAGATGGAGGACTTAGTGGCTAATATTGCAGGAGATGATGAAATTCAGGCTGTAGTTTCTGAAGTTCCTGAAATCATCCTCAGATGTATAAGCAGAGACGAAGCTGCCTTGGCTGTCGCCCAAAAAGCTTTCAAGGCTCTTTATGACAATGCATCAAGTAACCTTCACGTCAGTGCTAACCTAGCAATTCTTGTGGCTGTTCGAGATGTTTGCAAGCGTGTTGTTAAAGAGCTCACTAGTTGGGTGATTTATTCAGAGGAGGAGCGGAAGCTTAACAAAGACATTACTATCGGTCTTATCCAACGCGAGTTACTTAACCTAGCGGAGTACAATGTCCACATGGCGAAGTATCTTGATGGAGGGAGAAACAAAAGCGCCACTGACTTTTCTATTTCTCTACTCCAATCCTTGGTCACTGAGGAGTCAAGTGTCATTTCAGAGCTACACAGTCTTGTTGATGCACTGGCAAAGCTTTCCTCAAAATCTGGATCTCCCGAGTCATTGCAACAACTAATTGACATCATACGAAATCCAGTTACTAACACAAGTGATCACTCTGATAGCGCAATCGGAATTGAGAACAATGATAAGCAATCAAAGGATAAAAAGGTTGTGTACAATACCACCGCTAACATAGAAGAGAACACCAACTTGGAATTTGTGGAATCAGAGTCTGCGGGTTTCCGGATTCGGGTGTCCACACTTTTTGAAAGCTGGTATCAGATCTGCGAAGTTTCTGGTGCAAATGAAACCGCTTGTTCACAATACGTGTTGCATTTACATGAAACTGGACTACTTAAGGGAGATAATACAACAGAGAGTTTTTTCCGAATTCTTCTGGAACTTTCTGTTGCTCATTGTATATCTTCTGAAGAAATTAGTTCTGGTGCTGTGCAATCTCCTCAGCAAGCTCAGAGTCCATCATTCCTTATCATTGATATTTATGCCAAACTTGTTTTCTCGATCTTGAAGTATCTCCCGGAACAGGAGTCGTGCAGCAAGTTATTTCTTCTGTCGGAGATCATGGCTGTTACTGTGAGATCTATTCAAAAAGATGCAGAAGATAAAAAGACATCACTCAATCCAAGACCTTATTTTAGGTTATTCATCAATTGGCTACTGGACTTATGTTCCTTGGATCCCGGAACTGATGGTGCAAACTTTCAGGTTCTATCAGCTTTTGCCAGTGCATTCCACGCGTTGCAGCCTCTTAAGTTTCCCGCCTTCAGCTTTGCATGGCTAGAACTGGTCAGCCACAGAAGCTTTATGCCCAAGCTACTTACAGTAAATGGCCAGAAAGGTTGGCCATATGTTCAACGCCTGCTGGTAGACTTGCTCCAGTTTCTTGAGCCATTTTTGAGAAATGCCGAACTCGGAGGACCACTGGTCTCTCTTGTTTATTTATATCAATTATGCAAGGTTAATTTCCTATACAAAGGGACACTGAGAGTGTTACTGGTGCTGCTTCATGACTTTCCGGAGTTCCTCTGCGATTATCATTTTACTTTCTGCGACGTGATTCCTTCAAGTTGCATACAAATGCGAAATATTATTCTGAGTTCTTTTCCACGGAACATGAGGCTTCCAGATCCCTCGACCCCAAATTTAAAGATTGATTTGCTGCCGGAGATAGTAGAAGCTCCATGTATCCTTTCTGAGGTTGATGCTGCGCTAAAAGCAAAACAAATGAAGAATGACGTGGACGAGTATCTCGCTTCGAGGCAACAGAATTCTGCATACCTAAGTGAATTGAAGCAGAAGCTACTCCTGTCGTCCAGCGAGGCTAGCTCAGCTGAAACCCGTTACAGTGTACCATTGATCAACTCGCTTGTGCTATATACTGGAATTCAGGCTATCCAGCAGCTACAGGCGGGTGAGACACAGGCTCAAAATGTGGTGGCATTGCACATGTTCAAGTATTTAAGTATGGAACTTGATACGGAAGGGCGGTACCTGTTCCTTAATGCAATCGCCAATCAGCTTCGATATCCCAACAACCACACCCATTACTTCTCCTTCATCATGCTCTATCTCTTCTTCGAGTCTGACCAGGAGATCGTACAGGAGCAGATAACAAGAGTGTTGCTGGAAAGGCTAATTGTGAACAGGCCGCATCCATGGGGACTCCTGATAACATTCATAGAGCTGATAAAGAATCCAAGATATGGCTTCTGGAAACAAGCCTTCATCAGGTGTGCGCCTGAGATTGAGAAACTCTTTGAATCTGTCGCCAGATCCTGTGGTGGTCTCAAGCCCCCTGACGAGGGAATGGTCTCCGGTTGGGTCTCGGACAACTCTCATTAG |
| Protein: MVMNPSKVAGHARFLLESFSDSEVDSIAQEICQLVEYGVETSIPVLKTCLDCFAARRSHPNSSQLEKLISLVFKRVLKHSNLISHALRDVEVTDEFVADLTNALDFSISDKISFALSLAEFDSSDDANAAGRNLLLAMIEQLCANSAQIESTEQVQNILLFLQNSEDLSTHLNSFLHILSSTLPKDDFSFALTPILSQQLHEADVLRCIDFDTEFDAILAEIDKEISVGDLMGELGCGVTADAQLCKDILSSFAPLTEATISRILANVARTCADLEDNHTTFSTFSLVLGCCIPTELSTPMSWSVDILTETITQLAPGTSWRKVIENLDHSGFEIPNKESFSFFMRLYKTACKDPFPLDAVCGSVWKNVEGQISFLKYAIASPPEVFTFMHSPRKLVYIDDNMHSHEHQLGLSNEAWLSLDLLDVLCQLAERGHTVLVSSLLQYPLAQCPKTLLTGMTHIKTAYNLIQREVVSAILPVIITNSQDSGFILNLWHQNTELVLWGILNAQNLKADRILNLIDICHELKVLSVVLESVPISFSIRLAVLASLRGYLDIENWLPNFLCVYKDLFAEECLKFVKNVHFSESEDFTSEHFHPSDPLSDVHLDATTSLLKVLKAHDNVITSSQLVDEIEKVNAAILDCNSKLQNGEAKVSSASNAYGDDIEAEANAYFHQMFSGQLSVDAMVQMLSRYKDSSVQREKSIFDCMIANLFEEYRFFPKYPERQLKIASILFGSVIKHQLISSLTLGMALRLVLDSLRKPADSKMFLFGSKALEQFVNRLVELPQYCNHILQISHLRSTHPELVTVIEQALSRISSGNLESEAVSNPGPSQSFPGNGEFSGSGIGQSALQLPLPVQSQQKNEVHINGNSRVPSVPFIEAKTLLPSSSTTSADVSVIPKNPGISTSSLTSAGFVRPARGATSTRFGSALNIETLVAAAERRENAIETPPSDVQDKISFIINNISTANIESKGXXXXXXXXXXXXXXXXXXIESKWKEFAEILPQQYYPWFAQYMVMKRASIEPNFHDLYLKFLDKVDSKLLFKEILQNTYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRNYVLRAREIDPKSLIVEAYEKGLMIAVIPFTSKVLEPCQNSIAYQPPNPWTMAILGLLAEIYSMPNLKMNLKFDIEVLFKNLGVDLKEVAPTSLLKDRKREIDGNPDFSNKDLGVTHISQPQMIQEPKTISPLKQIDLPLDVADSPNTDASSKLFSQYVAPQRVYTNTLMEDEKVSTLGLSDQLPSPQGLFPSTPSPLFSISQLSAALPNIGNHVVINQKLSGFAMHFPFHRVVPLAMDRALKEIVSGIVQRSVCIACQTTKELVLKDYTLEPDETRIYNAAHLMVASLAGSLAHVTCKEPLRTSISCHLRNSLQGMNIKNEALEQIVQLVTNDNLDLGCAAIEQAATEKAIQTIDADIDQQLLLRKKHRDGAGSSLFDPNMLSQNSVSFIPESLRPKPGHLSLSQQRVYEDFVQLPWQKQTTQTSHGLSAASSSSGDVGLSSSYGPASGKSASDFLSSAGNARMDNVSRPLDISVEGFESPPVSLLSSQVDPAVDTAGLQFSKSLSTSELSLVESSDTAVKETGASLQTLTSAATMERLGGNNIIQPSLSTRDALEKYHIVTQKMEDLVANIAGDDEIQAVVSEVPEIILRCISRDEAALAVAQKAFKALYDNASSNLHVSANLAILVAVRDVCKRVVKELTSWVIYSEEERKLNKDITIGLIQRELLNLAEYNVHMAKYLDGGRNKSATDFSISLLQSLVTEESSVISELHSLVDALAKLSSKSGSPESLQQLIDIIRNPVTNTSDHSDSAIGIENNDKQSKDKKVVYNTTANIEENTNLEFVESESAGFRIRVSTLFESWYQICEVSGANETACSQYVLHLHETGLLKGDNTTESFFRILLELSVAHCISSEEISSGAVQSPQQAQSPSFLIIDIYAKLVFSILKYLPEQESCSKLFLLSEIMAVTVRSIQKDAEDKKTSLNPRPYFRLFINWLLDLCSLDPGTDGANFQVLSAFASAFHALQPLKFPAFSFAWLELVSHRSFMPKLLTVNGQKGWPYVQRLLVDLLQFLEPFLRNAELGGPLVSLVYLYQLCKVNFLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPSSCIQMRNIILSSFPRNMRLPDPSTPNLKIDLLPEIVEAPCILSEVDAALKAKQMKNDVDEYLASRQQNSAYLSELKQKLLLSSSEASSAETRYSVPLINSLVLYTGIQAIQQLQAGETQAQNVVALHMFKYLSMELDTEGRYLFLNAIANQLRYPNNHTHYFSFIMLYLFFESDQEIVQEQITRVLLERLIVNRPHPWGLLITFIELIKNPRYGFWKQAFIRCAPEIEKLFESVARSCGGLKPPDEGMVSGWVSDNSH |